STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99288.1Two-component response regulator. (127 aa)    
Predicted Functional Partners:
AKJ01449.1
Response regulator.
  
  
 
0.903
AKJ08182.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.889
AKI99519.1
Sensory box histidine kinase.
 
 
 0.852
AKJ00608.1
Sensor histidine kinase.
 
 
 0.843
AKJ08284.1
Sensory box histidine kinase.
 
 
 0.843
AKJ08110.1
Histidine protein kinase AsgD.
 
 
 0.840
AKJ01397.1
Sensory box histidine kinase.
 
 
 0.836
AKJ04443.1
Sensory box histidine kinase/response regulator.
 
 
 0.832
AKJ00613.1
Sensory box histidine kinase.
 
   0.830
AKJ06051.1
Sensory box histidine kinase.
 
 
 0.830
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.