Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99300.1Hypothetical protein. (519 aa)    
Predicted Functional Partners:
AKI99299.1
Hypothetical protein.
       0.773
AKI99301.1
Hypothetical protein.
       0.709
AKI99850.1
DNA topoisomerase III.
  
 0.617
AKJ07821.1
Hypothetical protein.
    
 0.559
AKJ07144.1
GTP cyclohydrolase II.
   
 
 0.529
AKJ01255.1
TolA protein.
   
 
 0.521
rplB
LSU ribosomal protein L2p; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
 
  0.520
AKI99726.1
High-affnity carbon uptake protein Hat/HatR.
  
 
   0.514
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
    
 0.504
AKI99302.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.498
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.