STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99307.1Putative ABC transporter permease protein. (281 aa)    
Predicted Functional Partners:
AKI99308.1
Methionine ABC transporter ATP-binding protein.
 0.996
AKI99309.1
VpsC protein.
 
 0.988
AKJ03704.1
Methionine ABC transporter ATP-binding protein.
 0.984
AKJ04136.1
Methionine ABC transporter ATP-binding protein.
 
 0.956
AKJ04137.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.953
AKJ03706.1
Mammalian cell entry related domain protein.
 
 0.925
AKJ03733.1
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
 0.858
AKJ07584.1
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
 0.849
AKI99306.1
Hypothetical protein.
       0.784
bamA
Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
     0.625
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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