Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99308.1Methionine ABC transporter ATP-binding protein. (272 aa)    
Predicted Functional Partners:
AKI99307.1
Putative ABC transporter permease protein.
 
 0.997
AKJ03703.1
ABC amino acid transporter, inner membrane subunit.
 0.992
AKJ04124.1
ABC transporter permease protein.
 
 0.988
AKJ04134.1
Putative ABC transporter, permease component YrbE.
 
 0.988
AKI99309.1
VpsC protein.
 
 0.987
AKJ04137.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.950
AKJ03706.1
Mammalian cell entry related domain protein.
 
 0.934
AKJ03733.1
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
 0.864
AKJ07584.1
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
 0.850
AKI99306.1
Hypothetical protein.
       0.783
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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