Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99357.1 | AKI99358.1 | AA314_00984 | AA314_00985 | Hypothetical protein. | TonB-dependent receptor. | 0.952 |
AKI99357.1 | AKI99362.1 | AA314_00984 | AA314_00989 | Hypothetical protein. | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.555 |
AKI99357.1 | AKI99821.1 | AA314_00984 | AA314_01448 | Hypothetical protein. | TonB family protein. | 0.505 |
AKI99357.1 | AKJ00837.1 | AA314_00984 | AA314_02463 | Hypothetical protein. | Peptidase, M19 family. | 0.520 |
AKI99357.1 | AKJ03212.1 | AA314_00984 | AA314_04838 | Hypothetical protein. | TonB family protein. | 0.479 |
AKI99357.1 | AKJ06332.1 | AA314_00984 | AA314_07958 | Hypothetical protein. | TonB family protein. | 0.607 |
AKI99357.1 | AKJ08151.1 | AA314_00984 | AA314_09777 | Hypothetical protein. | TonB family protein. | 0.510 |
AKI99357.1 | AKJ08275.1 | AA314_00984 | AA314_09901 | Hypothetical protein. | TonB-dependent receptor. | 0.640 |
AKI99358.1 | AKI99357.1 | AA314_00985 | AA314_00984 | TonB-dependent receptor. | Hypothetical protein. | 0.952 |
AKI99358.1 | AKI99362.1 | AA314_00985 | AA314_00989 | TonB-dependent receptor. | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.741 |
AKI99358.1 | AKI99821.1 | AA314_00985 | AA314_01448 | TonB-dependent receptor. | TonB family protein. | 0.705 |
AKI99358.1 | AKJ00837.1 | AA314_00985 | AA314_02463 | TonB-dependent receptor. | Peptidase, M19 family. | 0.649 |
AKI99358.1 | AKJ02790.1 | AA314_00985 | AA314_04416 | TonB-dependent receptor. | TonB-dependent receptor. | 0.656 |
AKI99358.1 | AKJ03212.1 | AA314_00985 | AA314_04838 | TonB-dependent receptor. | TonB family protein. | 0.863 |
AKI99358.1 | AKJ06332.1 | AA314_00985 | AA314_07958 | TonB-dependent receptor. | TonB family protein. | 0.890 |
AKI99358.1 | AKJ07519.1 | AA314_00985 | AA314_09145 | TonB-dependent receptor. | Ferric siderophore transport system, periplasmic binding protein TonB. | 0.648 |
AKI99358.1 | AKJ08151.1 | AA314_00985 | AA314_09777 | TonB-dependent receptor. | TonB family protein. | 0.872 |
AKI99358.1 | AKJ08275.1 | AA314_00985 | AA314_09901 | TonB-dependent receptor. | TonB-dependent receptor. | 0.721 |
AKI99362.1 | AKI99357.1 | AA314_00989 | AA314_00984 | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.555 |
AKI99362.1 | AKI99358.1 | AA314_00989 | AA314_00985 | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB-dependent receptor. | 0.741 |
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