STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99358.1TonB-dependent receptor. (966 aa)    
Predicted Functional Partners:
AKI99357.1
Hypothetical protein.
   
 0.952
AKJ06332.1
TonB family protein.
 
 
 0.890
AKJ08151.1
TonB family protein.
 
 
 0.872
AKJ03212.1
TonB family protein.
 
 
 0.863
AKI99362.1
Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.741
AKJ08275.1
TonB-dependent receptor.
  
  
 0.721
AKI99821.1
TonB family protein.
  
  
 0.705
AKJ02790.1
TonB-dependent receptor.
 
 
 0.656
AKJ00837.1
Peptidase, M19 family.
  
     0.649
AKJ07519.1
Ferric siderophore transport system, periplasmic binding protein TonB.
 
 
 0.648
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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