STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99362.1Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (244 aa)    
Predicted Functional Partners:
AKI99359.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.918
AKI99360.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.911
AKI99361.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.887
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
 
 
 0.749
AKI99358.1
TonB-dependent receptor.
 
 
 0.741
AKJ01388.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.740
AKJ01276.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.738
AKJ01275.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.737
AKJ04996.1
Outer membrane receptor protein, mostly Fe transport.
 
 
 0.724
AKJ01389.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.721
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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