STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99406.1Uracil-DNA glycosylase, putative family 6. (465 aa)    
Predicted Functional Partners:
AKI99405.1
Biotin synthase.
  
 0.960
AKJ02917.1
Uracil-DNA glycosylase, family 4.
  
  
0.925
AKJ03518.1
Uracil-DNA glycosylase, family 5.
     
 0.911
AKI99407.1
2-hydroxychromene-2-carboxylate isomerase.
       0.757
dnaE2
DNA polymerase III alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
    
 0.587
AKI99408.1
Hypothetical protein.
       0.572
AKJ05611.1
TsaB protein, required for threonylcarbamoyladenosine.
  
    0.498
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.472
AKI98921.1
Sensor histidine kinase.
  
     0.455
AKJ03441.1
DNA topoisomerase IB.
  
     0.401
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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