Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99357.1 | AKI99358.1 | AA314_00984 | AA314_00985 | Hypothetical protein. | TonB-dependent receptor. | 0.952 |
AKI99357.1 | AKI99411.1 | AA314_00984 | AA314_01038 | Hypothetical protein. | Oar protein. | 0.544 |
AKI99357.1 | AKJ03212.1 | AA314_00984 | AA314_04838 | Hypothetical protein. | TonB family protein. | 0.479 |
AKI99357.1 | AKJ07506.1 | AA314_00984 | AA314_09132 | Hypothetical protein. | SusC, outer membrane protein. | 0.476 |
AKI99358.1 | AKI99357.1 | AA314_00985 | AA314_00984 | TonB-dependent receptor. | Hypothetical protein. | 0.952 |
AKI99358.1 | AKI99411.1 | AA314_00985 | AA314_01038 | TonB-dependent receptor. | Oar protein. | 0.593 |
AKI99358.1 | AKJ03212.1 | AA314_00985 | AA314_04838 | TonB-dependent receptor. | TonB family protein. | 0.863 |
AKI99358.1 | AKJ06010.1 | AA314_00985 | AA314_07636 | TonB-dependent receptor. | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | 0.513 |
AKI99358.1 | AKJ07506.1 | AA314_00985 | AA314_09132 | TonB-dependent receptor. | SusC, outer membrane protein. | 0.515 |
AKI99410.1 | AKI99411.1 | AA314_01037 | AA314_01038 | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. | Oar protein. | 0.553 |
AKI99411.1 | AKI99357.1 | AA314_01038 | AA314_00984 | Oar protein. | Hypothetical protein. | 0.544 |
AKI99411.1 | AKI99358.1 | AA314_01038 | AA314_00985 | Oar protein. | TonB-dependent receptor. | 0.593 |
AKI99411.1 | AKI99410.1 | AA314_01038 | AA314_01037 | Oar protein. | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. | 0.553 |
AKI99411.1 | AKJ00603.1 | AA314_01038 | AA314_02229 | Oar protein. | Aminopeptidase. | 0.505 |
AKI99411.1 | AKJ02786.1 | AA314_01038 | AA314_04412 | Oar protein. | Isochorismatase. | 0.538 |
AKI99411.1 | AKJ03212.1 | AA314_01038 | AA314_04838 | Oar protein. | TonB family protein. | 0.481 |
AKI99411.1 | AKJ03555.1 | AA314_01038 | AA314_05181 | Oar protein. | Outer membrane vitamin B12 receptor BtuB. | 0.566 |
AKI99411.1 | AKJ05512.1 | AA314_01038 | AA314_07138 | Oar protein. | Peptidase M28. | 0.528 |
AKI99411.1 | AKJ06010.1 | AA314_01038 | AA314_07636 | Oar protein. | Nicel/Cobalt-specific TonB-dependent outer membrane receptor. | 0.535 |
AKI99411.1 | AKJ07506.1 | AA314_01038 | AA314_09132 | Oar protein. | SusC, outer membrane protein. | 0.584 |
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