STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99429.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
AKI99428.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.773
AKI99430.1
Short-chain dehydrogenase/reductase SDR.
       0.757
AKI99562.1
Hypothetical protein.
  
     0.563
AKJ00036.1
Hypothetical protein.
  
     0.463
AKJ05464.1
PTS system, fructose-specific IIA component.
 
   
 0.454
AKJ02128.1
Hypothetical protein.
  
     0.436
AKJ03073.1
Hypothetical protein.
  
     0.411
AKJ06588.1
Alpha/beta hydrolase fold protein.
  
     0.409
AKJ04809.1
Milk-clotting protease.
  
     0.402
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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