Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99449.1Acetyltransferase, GNAT family. (182 aa)    
Predicted Functional Partners:
AKJ03285.1
Acetyltransferase.
 
   
 0.577
AKI99450.1
Thioesterase family protein.
       0.554
AKI99448.1
Transcriptional regulator, ArsR family.
       0.543
AKI99486.1
Ribosomal-protein-S5p-alanine acetyltransferase.
 
   
 0.519
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.495
AKJ07534.1
Transcriptional regulator, MarR family.
 
 
 0.448
AKI98499.1
Acetyltransferase, GNAT family.
 
   
 0.445
AKI99445.1
Hypothetical protein.
       0.444
AKI99446.1
Hypothetical protein.
       0.434
AKI99447.1
Hypothetical protein.
       0.434
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.