STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99465.1Radical SAM, Pyruvate-formate lyase-activating enzyme. (357 aa)    
Predicted Functional Partners:
AKJ04725.1
Alcohol dehydrogenase.
  
  
 0.571
AKJ05989.1
Alcohol dehydrogenase.
  
  
 0.571
AKJ06405.1
Alcohol dehydrogenase.
  
  
 0.571
AKI99466.1
Hypothetical protein.
       0.495
AKJ07588.1
Xylulose kinase.
   
    0.452
AKJ03329.1
Rieske 2Fe-2S family protein.
  
  
 0.442
AKI99464.1
Hypothetical protein.
       0.437
AKJ00427.1
Ferredoxin, 2Fe-2S.
   
  
 0.428
AKJ01527.1
Hypothetical protein.
   
  
 0.428
AKJ04619.1
Ferredoxin, 2Fe-2S.
   
  
 0.428
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.