Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99466.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
AKJ01526.1
Putative integral membrane protein.
 
    0.675
AKJ07226.1
Hypothetical protein.
  
     0.670
AKI99967.1
Hypothetical protein.
 
     0.600
AKJ07227.1
Glycosyltransferase.
  
     0.584
AKJ03579.1
Hypothetical protein.
  
     0.580
AKJ02076.1
Putative immunogloblin.
  
     0.570
AKI99465.1
Radical SAM, Pyruvate-formate lyase-activating enzyme.
       0.495
AKI99467.1
Hypothetical protein.
       0.494
AKI98778.1
Hypothetical protein.
  
     0.482
AKJ02445.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.480
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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