Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99476.1 | AKI99477.1 | AA314_01103 | AA314_01104 | Protein export cytoplasm protein SecA ATPase RNA helicase. | Putative diheme cytochrome c-553. | 0.773 |
AKI99476.1 | AKI99478.1 | AA314_01103 | AA314_01105 | Protein export cytoplasm protein SecA ATPase RNA helicase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.537 |
AKI99476.1 | AKI99479.1 | AA314_01103 | AA314_01106 | Protein export cytoplasm protein SecA ATPase RNA helicase. | Hypothetical protein. | 0.418 |
AKI99477.1 | AKI99476.1 | AA314_01104 | AA314_01103 | Putative diheme cytochrome c-553. | Protein export cytoplasm protein SecA ATPase RNA helicase. | 0.773 |
AKI99477.1 | AKI99478.1 | AA314_01104 | AA314_01105 | Putative diheme cytochrome c-553. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.531 |
AKI99477.1 | AKI99479.1 | AA314_01104 | AA314_01106 | Putative diheme cytochrome c-553. | Hypothetical protein. | 0.418 |
AKI99478.1 | AKI99476.1 | AA314_01105 | AA314_01103 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Protein export cytoplasm protein SecA ATPase RNA helicase. | 0.537 |
AKI99478.1 | AKI99477.1 | AA314_01105 | AA314_01104 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative diheme cytochrome c-553. | 0.531 |
AKI99478.1 | AKI99479.1 | AA314_01105 | AA314_01106 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.592 |
AKI99478.1 | AKI99480.1 | AA314_01105 | AA314_01107 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.537 |
AKI99478.1 | AKJ01608.1 | AA314_01105 | AA314_03234 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase. | 0.976 |
AKI99478.1 | AKJ03735.1 | AA314_01105 | AA314_05361 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase. | 0.974 |
AKI99478.1 | AKJ06844.1 | AA314_01105 | AA314_08470 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 2-amino-3-ketobutyrate coenzyme A ligase. | 0.797 |
AKI99478.1 | bioB | AA314_01105 | AA314_02519 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.995 |
AKI99478.1 | bioD | AA314_01105 | AA314_02521 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.997 |
AKI99478.1 | bioF | AA314_01105 | AA314_02520 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.993 |
AKI99479.1 | AKI99476.1 | AA314_01106 | AA314_01103 | Hypothetical protein. | Protein export cytoplasm protein SecA ATPase RNA helicase. | 0.418 |
AKI99479.1 | AKI99477.1 | AA314_01106 | AA314_01104 | Hypothetical protein. | Putative diheme cytochrome c-553. | 0.418 |
AKI99479.1 | AKI99478.1 | AA314_01106 | AA314_01105 | Hypothetical protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.592 |
AKI99479.1 | AKI99480.1 | AA314_01106 | AA314_01107 | Hypothetical protein. | Hypothetical protein. | 0.822 |
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