STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99481.1Putative membrane protein. (84 aa)    
Predicted Functional Partners:
AKI99480.1
Hypothetical protein.
       0.556
AKI98782.1
Dimethylhistidine N-methyltransferase.
   
    0.523
AKI99479.1
Hypothetical protein.
       0.506
AKI98466.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.501
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.485
AKJ00215.1
Non-specific DNA-binding protein Dps; Belongs to the Dps family.
 
    0.461
AKJ00932.1
Cys-tRNA(Pro) deacylase YbaK.
   
    0.412
AKJ06500.1
Two component transcriptional regulator, LytTR family.
   
    0.412
AKJ03006.1
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
 
    0.411
AKI99478.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.400
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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