Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKI99484.1Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein. (225 aa)    
Predicted Functional Partners:
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.601
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.601
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.601
AKJ02929.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
    0.559
AKI99485.1
Diguanylate cyclase/phosphodiesterase.
  
    0.513
AKJ06739.1
Oxidoreductase, short chain dehydrogenase/reductase family.
 
    0.470
AKJ08017.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
    0.470
bamD
Competence protein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
    0.457
AKJ06160.1
Hypothetical protein.
  
  
 0.448
AKJ02072.1
Dehydrogenase with different specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.444
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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