Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKI99496.1PAS/PAC domain protein. (1085 aa)    
Predicted Functional Partners:
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.986
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.986
AKJ00035.1
Hypothetical protein.
  
 
 0.981
AKJ05823.1
Flagellar motor switch protein FliM.
  
 
 0.978
AKJ01380.1
Chemotaxis protein methyltransferase CheR.
 
0.977
AKJ07443.1
Chemotaxis protein methyltransferase CheR.
 
0.975
AKJ02082.1
Chemotaxis protein methyltransferase CheR.
 
0.973
AKJ00270.1
Hypothetical protein.
 
 
0.969
AKJ04546.1
Phytochrome, two-component sensor histidine kinase.
  
 
 0.967
AKJ08182.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.967
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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