STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99513.1High-affnity carbon uptake protein Hat/HatR. (486 aa)    
Predicted Functional Partners:
AKI99514.1
Argininosuccinate lyase.
       0.773
AKI99515.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
       0.752
AKI99512.1
Argininosuccinate lyase.
       0.727
AKI99511.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
       0.530
AKI99516.1
Arachidonate 15-lipoxygenase precursor.
       0.488
nhaA
Na+/H+ antiporter NhaA type; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
   
    0.461
AKI99050.1
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.437
AKJ00859.1
Alpha,alpha-trehalose-phosphate synthase.
   
    0.437
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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