STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99515.1Branched-chain amino acid ABC transporter, amino acid-binding protein. (954 aa)    
Predicted Functional Partners:
AKI99513.1
High-affnity carbon uptake protein Hat/HatR.
       0.752
AKI99514.1
Argininosuccinate lyase.
       0.752
AKI99512.1
Argininosuccinate lyase.
       0.707
AKI99511.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
 
    
0.551
AKJ08245.1
HAD superfamily.
  
     0.502
AKI99516.1
Arachidonate 15-lipoxygenase precursor.
       0.500
AKJ03653.1
HAD superfamily.
  
     0.453
AKJ07713.1
Fibronectin, type III domain protein.
  
     0.401
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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