Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99518.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
AKJ00467.1
CBS domain protein.
  
     0.549
AKJ02727.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
   
    0.521
AKI99519.1
Sensory box histidine kinase.
       0.517
AKI98774.1
CBS domain protein.
  
     0.515
AKI98547.1
CBS domain protein.
  
     0.510
AKI99517.1
Hypothetical protein.
       0.505
AKJ01008.1
Hypothetical protein.
  
     0.455
AKJ05827.1
Flagellar assembly protein FliH, putative.
  
     0.429
AKJ01998.1
Inosine-5'-monophosphate dehydrogenase.
  
     0.423
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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