STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99524.1Negative regulator of beta-lactamase expression. (535 aa)    
Predicted Functional Partners:
AKI99525.1
tolB protein precursor protein.
 
     0.716
AKJ05370.1
Hypothetical protein.
  
     0.703
AKJ00385.1
NHL repeat domain protein.
 
     0.654
AKJ03564.1
Putative secreted protein.
  
     0.641
AKJ03695.1
Membrane protein.
  
     0.625
AKJ01123.1
Putative membrane protein.
  
     0.611
AKJ00837.1
Peptidase, M19 family.
  
     0.596
AKJ00155.1
Squalene--hopene cyclase.
  
     0.590
AKJ03190.1
DNA gyrase subunit A.
  
     0.569
AKI99275.1
Hypothetical protein.
  
   
 0.542
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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