Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99525.1tolB protein precursor protein. (366 aa)    
Predicted Functional Partners:
AKI99524.1
Negative regulator of beta-lactamase expression.
 
     0.716
AKJ06617.1
MotA/TolQ/ExbB proton channel family protein.
 
  
 0.712
AKJ06618.1
Biopolymer transport protein ExbD/TolR.
 
  
 0.712
cpoB
TPR repeat containing exported protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.660
AKJ05042.1
TPR repeat containing exported protein.
 
  
 0.625
bamA
Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.618
AKJ02004.1
18K peptidoglycan-associated outer membrane lipoprotein.
 
 
 0.612
bamD
Competence protein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.580
AKI99360.1
Biopolymer transport protein ExbD/TolR.
 
  
 0.527
AKJ01276.1
Biopolymer transport protein ExbD/TolR.
 
  
 0.512
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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