STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99542.1Short-chain dehydrogenase/reductase SDR. (252 aa)    
Predicted Functional Partners:
AKI99543.1
Hypothetical protein.
       0.709
AKI99541.1
phi-Carotenoid synthase.
       0.543
AKI99540.1
Lycopene cyclase, CruA type.
       0.523
AKI99539.1
Ubiquinone biosynthesis monooxygenase UbiB.
       0.482
AKI99484.1
Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein.
 
     0.438
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.427
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.427
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.427
AKI99544.1
Hypothetical protein.
       0.400
AKI99545.1
Hypothetical protein.
       0.400
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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