STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99553.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
AKJ06647.1
Hypothetical protein.
 
     0.781
AKJ04329.1
Hypothetical protein.
  
     0.774
AKJ04420.1
Hypothetical protein.
  
     0.772
AKJ06613.1
Hypothetical protein.
  
     0.771
AKJ06643.1
TPR domain protein, putative.
  
     0.771
AKJ05724.1
General secretion pathway protein I.
  
     0.766
AKJ07626.1
Tryptophan synthase alpha chain.
  
     0.760
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
     0.755
AKI99554.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
       0.752
AKJ05726.1
Hypothetical protein.
  
     0.751
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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