Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99571.1Phosphoserine phosphatase rsbX. (337 aa)    
Predicted Functional Partners:
AKI99569.1
RsbS, negative regulator of sigma-B.
 
 
 0.987
AKI99568.1
RsbR, positive regulator of sigma-B.
 
 
 0.985
AKI99572.1
Putative SigmaB asociated two-component system sensor protein.
 
  
 0.914
AKI99570.1
Anti-sigma B factor RsbT.
 
    
0.833
AKJ05831.1
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
  
 
 0.781
AKJ07736.1
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.781
AKJ06391.1
Putative anti-sigma factor antagonist.
  
 
 0.749
AKJ02756.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.748
AKI99573.1
Chemotaxis protein methyltransferase CheR.
 
  
 0.742
AKJ05823.1
Flagellar motor switch protein FliM.
  
    0.709
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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