Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99572.1Putative SigmaB asociated two-component system sensor protein. (583 aa)    
Predicted Functional Partners:
AKI99569.1
RsbS, negative regulator of sigma-B.
 
 
 0.983
AKI99568.1
RsbR, positive regulator of sigma-B.
 
 
 0.982
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.975
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.975
AKJ00035.1
Hypothetical protein.
 
 
0.973
AKJ05823.1
Flagellar motor switch protein FliM.
  
 
 0.966
AKJ08006.1
Signal transduction histidine kinase CheA.
  
 
 0.957
AKI99786.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.954
AKJ04546.1
Phytochrome, two-component sensor histidine kinase.
 
 
0.952
AKJ08182.1
Chemotaxis protein methyltransferase CheR.
 
 
0.942
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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