STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99574.1N-acetylmuramoyl-L-alanine amidase. (371 aa)    
Predicted Functional Partners:
AKI99573.1
Chemotaxis protein methyltransferase CheR.
  
  
 0.541
AKJ04587.1
Putative esterase.
 
   
0.469
AKI99572.1
Putative SigmaB asociated two-component system sensor protein.
     
 0.455
AKI99569.1
RsbS, negative regulator of sigma-B.
       0.448
AKI99570.1
Anti-sigma B factor RsbT.
       0.448
AKI99571.1
Phosphoserine phosphatase rsbX.
       0.448
AKI99568.1
RsbR, positive regulator of sigma-B.
       0.435
AKI99575.1
Putative oxidoreductase.
       0.429
AKJ07232.1
Membrane-bound lytic murein transglycosylase D precursor.
 
  
 0.412
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.