STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99592.1Oligopeptide transporter, OPT family. (380 aa)    
Predicted Functional Partners:
AKI99593.1
Oligopeptide transporter, OPT family.
     0.992
AKJ04318.1
Oligopeptide transporter, OPT family.
  
     0.661
AKJ00900.1
Oligopeptide transporter, OPT family.
  
     0.551
AKI99594.1
Nucleotidase YfbR, HD superfamily.
       0.543
atpB
ATP synthase F0 sector subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
   
    0.442
AKI99591.1
Hydrolase, alpha/beta fold family.
       0.439
AKJ05614.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
    0.420
AKI99595.1
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
       0.406
AKI99596.1
Hypothetical protein.
       0.406
AKJ05071.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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