Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99626.1Ankyrin repeat protein. (157 aa)    
Predicted Functional Partners:
AKJ00362.1
Ankyrin repeat protein.
  
     0.772
AKI98803.1
Hypothetical protein.
  
     0.765
AKI99995.1
Hypothetical protein.
  
     0.765
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.713
AKJ02757.1
TPR domain protein, putative component of TonB system.
  
 
  0.655
AKJ07375.1
Chaperone protein DnaK.
 
 0.650
AKJ01255.1
TolA protein.
  
 0.622
AKJ01576.1
Adenylate cyclase.
 
 
  0.606
AKI98812.1
Hypothetical protein.
  
 
  0.595
AKJ06597.1
Ankyrin repeat protein.
  
     0.595
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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