AKI99631.1 protein (Archangium gephyra) - STRING interaction network

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Score

AKI99631.1

Hypothetical protein. (176 aa)

Predicted Functional Partners:

rplS

0.953

rpmA

0.952

rplP

0.945

rpmF

0.944

rpmJ

0.944

rplO

0.941

rpsB

0.940

rpsJ

0.940

rnc

0.940

rplM

0.939

Your Current Organism:

Archangium gephyra

NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKI99631.1	rnc	AA314_01258	AA314_05464	Hypothetical protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.940
AKI99631.1	rplM	AA314_01258	AA314_03347	Hypothetical protein.	LSU ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.939
AKI99631.1	rplO	AA314_01258	AA314_04747	Hypothetical protein.	LSU ribosomal protein L15p; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.941
AKI99631.1	rplP	AA314_01258	AA314_04735	Hypothetical protein.	LSU ribosomal protein L16p; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.945
AKI99631.1	rplS	AA314_01258	AA314_05052	Hypothetical protein.	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.953
AKI99631.1	rpmA	AA314_01258	AA314_02929	Hypothetical protein.	LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.	0.952
AKI99631.1	rpmF	AA314_01258	AA314_04140	Hypothetical protein.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.944
AKI99631.1	rpmJ	AA314_01258	AA314_04753	Hypothetical protein.	LSU ribosomal protein L36p; Belongs to the bacterial ribosomal protein bL36 family.	0.944
AKI99631.1	rpsB	AA314_01258	AA314_03526	Hypothetical protein.	SSU ribosomal protein S2p; Belongs to the universal ribosomal protein uS2 family.	0.940
AKI99631.1	rpsJ	AA314_01258	AA314_04728	Hypothetical protein.	SSU ribosomal protein S10p; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.940
rnc	AKI99631.1	AA314_05464	AA314_01258	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Hypothetical protein.	0.940
rnc	rplM	AA314_05464	AA314_03347	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.957
rnc	rplO	AA314_05464	AA314_04747	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L15p; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.944
rnc	rplP	AA314_05464	AA314_04735	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L16p; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.940
rnc	rplS	AA314_05464	AA314_05052	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.966
rnc	rpmA	AA314_05464	AA314_02929	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.	0.969
rnc	rpmF	AA314_05464	AA314_04140	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.952
rnc	rpmJ	AA314_05464	AA314_04753	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	LSU ribosomal protein L36p; Belongs to the bacterial ribosomal protein bL36 family.	0.934
rnc	rpsB	AA314_05464	AA314_03526	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	SSU ribosomal protein S2p; Belongs to the universal ribosomal protein uS2 family.	0.947
rnc	rpsJ	AA314_05464	AA314_04728	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	SSU ribosomal protein S10p; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.943