Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99648.1Vanillate O-demethylase oxygenase like protein. (336 aa)    
Predicted Functional Partners:
AKI99389.1
Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA.
 
 
 0.877
AKJ08370.1
Flavodoxin reductase.
 
  
 0.717
AKI99649.1
Transcriptional regulator, TetR family.
 
     0.700
AKI99388.1
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB.
  
     0.686
AKI99647.1
Hypothetical protein.
       0.576
AKI99703.1
4-oxalocrotonate decarboxylase.
 
   
 0.513
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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