STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99654.1Chitinase. (2205 aa)    
Predicted Functional Partners:
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
   
 0.593
AKJ03911.1
NHL repeat containing protein.
  
     0.567
AKJ07109.1
Hypothetical protein.
  
     0.554
AKJ07688.1
Hypothetical protein.
  
     0.539
AKJ00021.1
Fatty acid desaturase family protein.
  
     0.514
AKJ03743.1
LysM domain protein.
  
     0.514
AKI99216.1
Endonuclease/exonuclease/phosphatase family protein.
  
   
 0.510
AKJ07838.1
Nudix hydrolase 3.
  
 
   0.489
AKJ05733.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.486
AKJ02201.1
Hypothetical protein.
  
     0.476
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.