Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99678.1Putative diheme cytochrome c-553. (433 aa)    
Predicted Functional Partners:
AKI99679.1
D-aminopeptidase dipeptide-binding protein DppA.
       0.741
AKI99677.1
Putative fatty acid hydroxylase.
 
     0.588
AKJ05279.1
Hypothetical protein.
  
     0.581
AKJ07753.1
Putative lipoprotein.
  
     0.579
AKJ04122.1
Putative lipoprotein.
  
     0.523
AKJ05391.1
Internalin, putative.
  
     0.512
AKJ03569.1
Phage tail fiber protein.
  
     0.498
AKJ00991.1
Nitric-oxide reductase.
  
  
 0.489
AKJ01501.1
Nitric-oxide reductase.
  
  
 0.489
AKI99073.1
Hypothetical protein.
 
    0.483
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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