STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99724.1Chemotaxis regulator. (145 aa)    
Predicted Functional Partners:
AKJ07796.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
     
  0.900
AKJ00404.1
DNA-binding response regulator, AraC family.
 
  
 0.809
AKJ02455.1
Response regulator.
 
   0.771
AKJ07998.1
Two component heavy metal response transcriptional regulator, winged helix family.
  
   0.770
AKJ08006.1
Signal transduction histidine kinase CheA.
  
 
 0.767
AKJ00660.1
Response regulator.
  
   0.763
AKJ08451.1
DNA-binding response regulator KdpE.
  
   0.763
AKI99344.1
Response regulator.
  
   0.756
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
   0.756
AKJ07084.1
Putative response regulator/chemotaxis protein CheW.
 
 
 0.755
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.