STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99735.1Inner spore coat protein H. (570 aa)    
Predicted Functional Partners:
AKI99350.1
Phosphoesterase protein.
 
     0.776
AKI99115.1
Hypothetical protein.
  
     0.774
AKJ01018.1
Peptidase, M19 family.
  
     0.767
AKJ00837.1
Peptidase, M19 family.
  
     0.766
AKJ06761.1
Molybdate metabolism regulator.
  
     0.737
AKJ07109.1
Hypothetical protein.
  
     0.733
AKJ03743.1
LysM domain protein.
  
   
 0.731
AKJ06632.1
Cellulosomal protein.
  
     0.727
AKJ00754.1
Internalin, putative.
  
     0.718
AKJ02440.1
Stress response; Belongs to the sigma-70 factor family.
  
     0.715
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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