STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99740.1Hypothetical protein. (556 aa)    
Predicted Functional Partners:
AKJ03448.1
Sensor histidine kinase.
 
 
   0.778
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.774
AKJ07515.1
Microbial collagenase, secreted.
  
     0.774
AKJ00154.1
Hypothetical protein.
  
     0.773
AKJ06280.1
Signal recognition particle receptor protein FtsY.
  
     0.773
AKJ07049.1
Hypothetical protein.
  
     0.773
AKJ03516.1
Hypothetical protein.
  
     0.772
AKJ04091.1
Protein ImpG/VasA.
  
     0.772
AKJ04095.1
Hypothetical protein.
  
     0.770
AKJ07493.1
Cytochrome c family protein.
  
     0.770
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.