Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99755.1Cysteine desulfurase. (396 aa)    
Predicted Functional Partners:
AKJ00771.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
 
 
 0.919
AKJ00768.1
Iron-sulfur cluster assembly ATPase protein SufC.
  
 0.914
AKJ00767.1
Iron-sulfur cluster assembly protein SufB.
 
 0.883
AKJ00769.1
Iron-sulfur cluster assembly protein SufD.
 
 0.875
AKJ02199.1
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 
 0.802
AKI99756.1
Putative oxidoreductase, Zn-binding protein.
     
 0.553
AKJ01629.1
Cysteine desulfurase.
  
     0.550
AKJ00302.1
Cysteine desulfurase.
  
     0.539
AKJ00772.1
Probably aromatic ring hydroxylating enzyme.
 
  
 0.539
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.489
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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