STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99757.1Pyridoxamine 5'-phosphate oxidase. (175 aa)    
Predicted Functional Partners:
AKI98466.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.791
AKI98831.1
Flavin reductase.
  
    0.632
AKJ01444.1
Cell division inhibitor.
  
    0.599
AKJ00237.1
Cell division inhibitor.
  
    0.587
AKJ01341.1
Cell division inhibitor.
  
    0.587
AKJ06716.1
Glutamate synthase [NADPH] large chain.
 
    0.564
AKJ00440.1
Phytochrome, two-component sensor histidine kinase.
  
     0.557
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
  
 0.555
AKJ01381.1
Phytochrome, two-component sensor histidine kinase.
  
     0.523
AKI98959.1
Hypothetical protein.
  
     0.500
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.