Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKI99757.1Pyridoxamine 5'-phosphate oxidase. (175 aa)    
Predicted Functional Partners:
AKI98466.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.593
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
  
 0.573
AKJ06716.1
Glutamate synthase [NADPH] large chain.
 
  
 0.573
AKJ00440.1
Phytochrome, two-component sensor histidine kinase.
  
     0.557
AKJ03368.1
Glycine amidinotransferase.
  
    0.540
AKJ01381.1
Phytochrome, two-component sensor histidine kinase.
  
     0.523
AKI98959.1
Hypothetical protein.
  
     0.500
AKI98662.1
Hypothetical protein.
  
     0.486
AKJ06399.1
Hypothetical protein.
  
     0.484
AKJ03441.1
DNA topoisomerase IB.
 
     0.470
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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