STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99770.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
AKI99771.1
Hypothetical protein.
       0.773
AKJ07015.1
Peptidase C14 caspase catalytic subunit p20.
 
     0.733
AKI99821.1
TonB family protein.
  
     0.725
AKJ00601.1
Peptidase C14 caspase catalytic subunit p20.
 
     0.720
AKJ08151.1
TonB family protein.
  
     0.714
AKJ06074.1
Peptidase C14 caspase catalytic subunit p20.
 
     0.690
AKJ04765.1
Peptidase C14 caspase catalytic subunit p20.
 
 
   0.680
AKJ02333.1
Peptidase C14, caspase catalytic subunit p20.
 
     0.676
AKJ03212.1
TonB family protein.
  
     0.672
AKJ03782.1
Peptidase C14 caspase catalytic subunit p20.
 
     0.668
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.