Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI99785.1Sensory box histidine kinase/response regulator. (551 aa)    
Predicted Functional Partners:
AKI99786.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.899
AKI99519.1
Sensory box histidine kinase.
 
 
 
0.894
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.893
AKI99496.1
PAS/PAC domain protein.
 
 
0.887
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.875
AKJ00035.1
Hypothetical protein.
  
 
 0.865
AKJ00612.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.853
AKJ08182.1
Chemotaxis protein methyltransferase CheR.
 
 
0.853
AKJ04546.1
Phytochrome, two-component sensor histidine kinase.
  
 
 0.848
AKJ00608.1
Sensor histidine kinase.
 
0.811
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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