STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99795.1Peptidyl-prolyl cis-trans isomerase PpiD. (171 aa)    
Predicted Functional Partners:
AKI99794.1
Peptidyl-prolyl cis-trans isomerase PpiD.
      0.873
AKI99793.1
Peptidyl-prolyl cis-trans isomerase PpiD.
  
  
 0.798
AKI99792.1
Survival protein SurA precursor.
  
  
 0.700
AKI99791.1
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
  
  
 0.678
AKI99796.1
Polyhydroxyalkanoic acid synthase.
       0.580
AKJ02655.1
Peptidyl-prolyl cis-trans isomerase PpiA precursor.
  
 0.436
AKI99797.1
Hypothetical protein.
   
   0.430
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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