AKI99799.1 protein (Archangium gephyra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AKI99799.1

Histidine kinase. (442 aa)

Predicted Functional Partners:

AKJ08286.1

0.796

AKJ00612.1

0.793

AKJ02855.1

0.789

AKJ00126.1

0.786

AKJ01383.1

0.784

AKI99082.1

0.777

AKI99081.1

0.775

AKJ06706.1

0.773

AKJ06717.1

0.766

AKJ01161.1

0.764

Your Current Organism:

Archangium gephyra

NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKI99081.1	AKI99082.1	AA314_00708	AA314_00709	Chemotaxis protein methyltransferase CheR.	Chemotaxis protein methyltransferase CheR.	0.944
AKI99081.1	AKI99799.1	AA314_00708	AA314_01426	Chemotaxis protein methyltransferase CheR.	Histidine kinase.	0.775
AKI99081.1	AKJ00126.1	AA314_00708	AA314_01752	Chemotaxis protein methyltransferase CheR.	Histidine protein kinase AsgD.	0.706
AKI99081.1	AKJ00612.1	AA314_00708	AA314_02238	Chemotaxis protein methyltransferase CheR.	Diguanylate cyclase/phosphodiesterase.	0.961
AKI99081.1	AKJ01161.1	AA314_00708	AA314_02787	Chemotaxis protein methyltransferase CheR.	Sensor histidine kinase.	0.585
AKI99081.1	AKJ01383.1	AA314_00708	AA314_03009	Chemotaxis protein methyltransferase CheR.	Chemotaxis protein methyltransferase CheR.	0.850
AKI99081.1	AKJ02855.1	AA314_00708	AA314_04481	Chemotaxis protein methyltransferase CheR.	Adenylate cyclase.	0.662
AKI99081.1	AKJ06706.1	AA314_00708	AA314_08332	Chemotaxis protein methyltransferase CheR.	Chemotaxis protein methyltransferase CheR.	0.860
AKI99081.1	AKJ06717.1	AA314_00708	AA314_08343	Chemotaxis protein methyltransferase CheR.	Sensory box/GGDEF family protein.	0.601
AKI99081.1	AKJ08286.1	AA314_00708	AA314_09912	Chemotaxis protein methyltransferase CheR.	Histidine protein kinase AsgD.	0.851
AKI99082.1	AKI99081.1	AA314_00709	AA314_00708	Chemotaxis protein methyltransferase CheR.	Chemotaxis protein methyltransferase CheR.	0.944
AKI99082.1	AKI99799.1	AA314_00709	AA314_01426	Chemotaxis protein methyltransferase CheR.	Histidine kinase.	0.777
AKI99082.1	AKJ00126.1	AA314_00709	AA314_01752	Chemotaxis protein methyltransferase CheR.	Histidine protein kinase AsgD.	0.711
AKI99082.1	AKJ00612.1	AA314_00709	AA314_02238	Chemotaxis protein methyltransferase CheR.	Diguanylate cyclase/phosphodiesterase.	0.962
AKI99082.1	AKJ01161.1	AA314_00709	AA314_02787	Chemotaxis protein methyltransferase CheR.	Sensor histidine kinase.	0.584
AKI99082.1	AKJ01383.1	AA314_00709	AA314_03009	Chemotaxis protein methyltransferase CheR.	Chemotaxis protein methyltransferase CheR.	0.852
AKI99082.1	AKJ02855.1	AA314_00709	AA314_04481	Chemotaxis protein methyltransferase CheR.	Adenylate cyclase.	0.662
AKI99082.1	AKJ06706.1	AA314_00709	AA314_08332	Chemotaxis protein methyltransferase CheR.	Chemotaxis protein methyltransferase CheR.	0.860
AKI99082.1	AKJ06717.1	AA314_00709	AA314_08343	Chemotaxis protein methyltransferase CheR.	Sensory box/GGDEF family protein.	0.604
AKI99082.1	AKJ08286.1	AA314_00709	AA314_09912	Chemotaxis protein methyltransferase CheR.	Histidine protein kinase AsgD.	0.852