STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99799.1Histidine kinase. (442 aa)    
Predicted Functional Partners:
AKJ08286.1
Histidine protein kinase AsgD.
  
   0.796
AKJ00612.1
Diguanylate cyclase/phosphodiesterase.
  
 
 
 0.793
AKJ02855.1
Adenylate cyclase.
  
 
   0.789
AKJ00126.1
Histidine protein kinase AsgD.
 
 
 
 0.786
AKJ01383.1
Chemotaxis protein methyltransferase CheR.
  
   0.784
AKI99082.1
Chemotaxis protein methyltransferase CheR.
  
 
 
 0.777
AKI99081.1
Chemotaxis protein methyltransferase CheR.
  
 
 
 0.775
AKJ06706.1
Chemotaxis protein methyltransferase CheR.
 
 
   0.773
AKJ06717.1
Sensory box/GGDEF family protein.
  
 
   0.766
AKJ01161.1
Sensor histidine kinase.
  
 
   0.764
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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