Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99808.1Hypothetical protein. (555 aa)    
Predicted Functional Partners:
AKJ01921.1
Hypothetical protein.
  
     0.628
AKJ07865.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.619
AKJ07769.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.600
AKJ03564.1
Putative secreted protein.
  
     0.574
AKJ03535.1
Extracellular protease precursor.
 
   
 0.566
AKJ04752.1
Extracellular protease precursor.
 
   
 0.561
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
   
    0.552
AKJ00837.1
Peptidase, M19 family.
  
     0.548
AKI99807.1
Lipid A export ATP-binding/permease protein MsbA.
       0.547
AKJ01018.1
Peptidase, M19 family.
  
     0.538
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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