STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99812.1TonB-dependent receptor. (980 aa)    
Predicted Functional Partners:
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
 
 
 0.867
AKI99813.1
Hypothetical protein.
       0.752
AKJ02790.1
TonB-dependent receptor.
 
 
 0.731
AKJ06461.1
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
  
     0.727
AKJ06576.1
Serine/threonine protein kinase.
  
 
   0.720
AKJ01278.1
Ferric siderophore transport system, periplasmic binding protein TonB.
 
 
 0.706
AKJ04256.1
Hypothetical protein.
  
     0.703
AKJ07519.1
Ferric siderophore transport system, periplasmic binding protein TonB.
 
 
 0.692
AKI99353.1
Hypothetical protein.
  
     0.684
AKJ06852.1
Putative secreted protein.
  
     0.672
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.