Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI99813.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
AKJ02600.1
Cell division protein FtsK.
 
 
 
 0.769
AKI99203.1
Putative asmA protein precursor.
  
     0.761
AKI99812.1
TonB-dependent receptor.
       0.752
AKJ02410.1
TPR domain protein, putative component of TonB system.
 
 
   0.734
AKJ02194.1
Hypothetical protein.
 
     0.718
AKJ02316.1
PDZ domain protein.
  
     0.717
AKI98548.1
Iron-sulfur cluster-binding protein, Rieske family.
 
    0.669
AKJ02163.1
Response regulator/GGDEF/GAF domain protein.
  
 
   0.668
AKJ00687.1
Cell division protein FtsK.
 
 
   0.659
AKJ07742.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.654
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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