STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99817.1Hypothetical protein. (1270 aa)    
Predicted Functional Partners:
AKI99115.1
Hypothetical protein.
 
    0.774
AKJ07549.1
Hypothetical protein.
  
     0.768
AKJ04075.1
Hypothetical protein.
  
     0.767
AKJ02201.1
Hypothetical protein.
  
     0.765
AKJ02042.1
RTX toxin.
  
     0.757
AKI99949.1
Hypothetical protein.
  
     0.750
AKJ07994.1
Trehalose synthase.
  
     0.742
AKJ06239.1
Trehalose synthase.
  
     0.738
AKJ01134.1
Trehalose synthase.
  
     0.737
AKJ01279.1
Hypothetical protein.
  
     0.737
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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