STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99820.1Flagellar motor rotation protein MotB. (298 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
 
  
 0.922
AKJ05826.1
Flagellum-specific ATP synthase FliI.
 
  
 0.827
AKJ05818.1
Flagellar biosynthesis protein FlhB.
 
  
 0.786
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
  
 0.784
AKJ06422.1
Flagellar biosynthesis protein FlhB.
 
  
 0.768
AKJ05831.1
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
 
  
 0.745
AKJ05817.1
Flagellar biosynthesis protein FlhB.
 
  
 0.743
AKJ08006.1
Signal transduction histidine kinase CheA.
 
  
 0.739
AKJ00072.1
Hypothetical protein.
  
  
 0.737
AKJ06424.1
Flagellar biosynthesis protein FliQ.
 
  
 0.697
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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