STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99821.1TonB family protein. (663 aa)    
Predicted Functional Partners:
AKJ02790.1
TonB-dependent receptor.
 
 
 0.811
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
 
 
 0.737
AKI99770.1
Hypothetical protein.
  
     0.725
AKI99358.1
TonB-dependent receptor.
  
  
 0.705
AKJ01574.1
Putative abductin-like protein.
 
 
 0.691
AKJ04296.1
Putative abductin-like protein.
 
 
 0.659
AKI99270.1
Peptidase C14 caspase catalytic subunit p20.
  
     0.623
AKJ02365.1
Putative Ig-like domain protein.
  
     0.618
AKI99216.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.615
AKJ01264.1
Hypothetical protein.
  
     0.611
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.