STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99828.1Fatty-acid-CoA ligase FadD7. (509 aa)    
Predicted Functional Partners:
AKI99829.1
2-dehydropantoate 2-reductase.
 
     0.934
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
0.809
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
0.809
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
0.809
AKJ05085.1
Malonyl CoA-acyl carrier protein transacylase.
 
 0.679
AKJ03615.1
Malonyl CoA-acyl carrier protein transacylase.
  
0.675
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
 
 
0.656
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
 
 0.653
AKJ05084.1
Malonyl CoA-acyl carrier protein transacylase.
 
 0.633
AKJ01545.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
0.623
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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