Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99388.1 | AKI99389.1 | AA314_01015 | AA314_01016 | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | 0.998 |
AKI99388.1 | AKI99703.1 | AA314_01015 | AA314_01330 | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | 4-oxalocrotonate decarboxylase. | 0.764 |
AKI99388.1 | AKI99853.1 | AA314_01015 | AA314_01480 | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | Rieske. | 0.524 |
AKI99388.1 | AKJ08370.1 | AA314_01015 | AA314_09996 | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | Flavodoxin reductase. | 0.808 |
AKI99389.1 | AKI99388.1 | AA314_01016 | AA314_01015 | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | 0.998 |
AKI99389.1 | AKI99703.1 | AA314_01016 | AA314_01330 | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | 4-oxalocrotonate decarboxylase. | 0.602 |
AKI99389.1 | AKI99853.1 | AA314_01016 | AA314_01480 | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | Rieske. | 0.862 |
AKI99389.1 | AKJ08370.1 | AA314_01016 | AA314_09996 | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | Flavodoxin reductase. | 0.667 |
AKI99703.1 | AKI99388.1 | AA314_01330 | AA314_01015 | 4-oxalocrotonate decarboxylase. | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | 0.764 |
AKI99703.1 | AKI99389.1 | AA314_01330 | AA314_01016 | 4-oxalocrotonate decarboxylase. | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | 0.602 |
AKI99703.1 | AKI99853.1 | AA314_01330 | AA314_01480 | 4-oxalocrotonate decarboxylase. | Rieske. | 0.442 |
AKI99703.1 | AKJ08370.1 | AA314_01330 | AA314_09996 | 4-oxalocrotonate decarboxylase. | Flavodoxin reductase. | 0.645 |
AKI99852.1 | AKI99853.1 | AA314_01479 | AA314_01480 | Cardiolipin synthetase. | Rieske. | 0.532 |
AKI99853.1 | AKI99388.1 | AA314_01480 | AA314_01015 | Rieske. | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | 0.524 |
AKI99853.1 | AKI99389.1 | AA314_01480 | AA314_01016 | Rieske. | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | 0.862 |
AKI99853.1 | AKI99703.1 | AA314_01480 | AA314_01330 | Rieske. | 4-oxalocrotonate decarboxylase. | 0.442 |
AKI99853.1 | AKI99852.1 | AA314_01480 | AA314_01479 | Rieske. | Cardiolipin synthetase. | 0.532 |
AKI99853.1 | AKJ08370.1 | AA314_01480 | AA314_09996 | Rieske. | Flavodoxin reductase. | 0.763 |
AKJ08370.1 | AKI99388.1 | AA314_09996 | AA314_01015 | Flavodoxin reductase. | Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB. | 0.808 |
AKJ08370.1 | AKI99389.1 | AA314_09996 | AA314_01016 | Flavodoxin reductase. | Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA. | 0.667 |
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