STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI99866.1Sensory box histidine kinase. (584 aa)    
Predicted Functional Partners:
AKI99343.1
Sensory box histidine kinase.
 
 0.786
AKI99081.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.784
AKI99082.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.783
AKJ06719.1
Sensory box histidine kinase.
 
 
 
 0.782
AKJ00613.1
Sensory box histidine kinase.
 
 
 
 0.773
AKJ06717.1
Sensory box/GGDEF family protein.
 
 
 0.772
AKJ03050.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.771
AKJ07267.1
Diguanylate cyclase/phosphodiesterase.
  
 
   0.760
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.741
AKJ04846.1
Phosphate regulon sensor protein PhoR.
  
 
   0.728
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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